Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3B9F7
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 4
Sequence positions:
: 36-57|80-97|112-135|159-175
Tilt angles:
- Segment: 36-57 - Tilt: 45.7°
- Segment: 80-97 - Tilt: 34.2°
- Segment: 112-135 - Tilt: 21.8°
- Segment: 159-175 - Tilt: 26.6°
Structural assessment:
MAIDEN score = -16.3575
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]