Putative transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3BAP8
Pfam Acc: PF00153
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.8 Å
Number of TM segments = 6
Sequence positions:
: 28-51|77-100|120-152|154-202|210-243|269-291
Tilt angles:
- Segment: 28-51 - Tilt: 10.6°
- Segment: 77-100 - Tilt: 40.9°
- Segment: 120-152 - Tilt: 55.6°
- Segment: 154-202 - Tilt: 53.4°
- Segment: 210-243 - Tilt: 50.1°
- Segment: 269-291 - Tilt: 35.8°
Structural assessment:
MAIDEN score = -28.9998
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]