Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3BDG1
Pfam Acc: PF00153
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 5
Sequence positions:
: 12-38|62-89|106-134|158-179|239-262
Tilt angles:
- Segment: 12-38 - Tilt: 41.0°
- Segment: 62-89 - Tilt: 47.5°
- Segment: 106-134 - Tilt: 44.6°
- Segment: 158-179 - Tilt: 38.5°
- Segment: 239-262 - Tilt: 28.6°
Structural assessment:
MAIDEN score = 9.8898
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]