Cytochrome c biogenesis protein, transmembrane region protein
Organism: Raphidiopsis brookii
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D4TQP6
Pfam Acc: PF02683
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 9
Sequence positions:
: 35-49|52-66|85-95|97-115|123-135|137-146|161-176|192-200|202-216
Tilt angles:
- Segment: 35-49 - Tilt: 30.6°
- Segment: 52-66 - Tilt: 46.0°
- Segment: 85-95 - Tilt: 33.0°
- Segment: 97-115 - Tilt: 41.1°
- Segment: 123-135 - Tilt: 29.5°
- Segment: 137-146 - Tilt: 43.0°
- Segment: 161-176 - Tilt: 23.7°
- Segment: 192-200 - Tilt: 39.9°
- Segment: 202-216 - Tilt: 9.6°
Structural assessment:
MAIDEN score = 10.2844
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]