ABC transporter, transmembrane region protein
Organism: Raphidiopsis brookii
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D4TRM2
Pfam Acc: PF00664
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 6
Sequence positions:
: 19-40|72-89|133-155|157-180|234-252|274-296
Tilt angles:
- Segment: 19-40 - Tilt: 44.5°
- Segment: 72-89 - Tilt: 30.4°
- Segment: 133-155 - Tilt: 55.8°
- Segment: 157-180 - Tilt: 58.7°
- Segment: 234-252 - Tilt: 45.1°
- Segment: 274-296 - Tilt: 23.6°
Structural assessment:
MAIDEN score = -26.6335
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]