porin
Organism: Shewanella violacea
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: D4ZC36
Pfam ID: PF07396
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 15
Sequence positions:
: 31-41|52-62|70-82|87-95|104-134|136-150|159-168|181-187|200-206|246-252|262-268|282-288|311-317|338-345|353-361
Tilt angles:
- Segment: 31-41 - Tilt: 57.4°
- Segment: 52-62 - Tilt: 55.4°
- Segment: 70-82 - Tilt: 28.2°
- Segment: 87-95 - Tilt: 31.9°
- Segment: 104-134 - Tilt: 52.2°
- Segment: 136-150 - Tilt: 36.6°
- Segment: 159-168 - Tilt: 36.4°
- Segment: 181-187 - Tilt: 29.1°
- Segment: 200-206 - Tilt: 30.3°
- Segment: 246-252 - Tilt: 30.4°
- Segment: 262-268 - Tilt: 30.4°
- Segment: 282-288 - Tilt: 35.2°
- Segment: 311-317 - Tilt: 35.6°
- Segment: 338-345 - Tilt: 45.9°
- Segment: 353-361 - Tilt: 46.9°
Structural assessment:
MAIDEN score = 63.5854
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]