Transmembrane transporter
Organism: Bacteroides sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D7IS25
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 9
Sequence positions:
: 25-37|50-63|85-96|103-116|216-235|242-253|274-286|293-304|343-353
Tilt angles:
- Segment: 25-37 - Tilt: 26.7°
- Segment: 50-63 - Tilt: 29.1°
- Segment: 85-96 - Tilt: 28.4°
- Segment: 103-116 - Tilt: 33.3°
- Segment: 216-235 - Tilt: 49.1°
- Segment: 242-253 - Tilt: 38.3°
- Segment: 274-286 - Tilt: 35.3°
- Segment: 293-304 - Tilt: 31.9°
- Segment: 343-353 - Tilt: 35.8°
Structural assessment:
MAIDEN score = 20.4314
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]