Putative transmembrane transport protein
Organism: Prevotella bryantii
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D8DWG7
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.3 Å
Number of TM segments = 12
Sequence positions:
: 12-32|46-61|78-94|97-121|136-154|164-183|213-230|246-261|274-292|295-312|335-354|356-375
Tilt angles:
- Segment: 12-32 - Tilt: 39.3°
- Segment: 46-61 - Tilt: 7.2°
- Segment: 78-94 - Tilt: 21.3°
- Segment: 97-121 - Tilt: 41.1°
- Segment: 136-154 - Tilt: 15.0°
- Segment: 164-183 - Tilt: 15.8°
- Segment: 213-230 - Tilt: 26.8°
- Segment: 246-261 - Tilt: 12.2°
- Segment: 274-292 - Tilt: 21.4°
- Segment: 295-312 - Tilt: 32.5°
- Segment: 335-354 - Tilt: 26.8°
- Segment: 356-375 - Tilt: 26.1°
Structural assessment:
MAIDEN score = -16.7214
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]