Putative transmembrane transport protein
Organism: Prevotella bryantii
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D8DWG7
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 12
Sequence positions:
: 11-32|47-65|75-88|106-124|138-153|167-182|213-230|245-258|276-291|295-311|335-351|360-375
Tilt angles:
- Segment: 11-32 - Tilt: 48.3°
- Segment: 47-65 - Tilt: 37.4°
- Segment: 75-88 - Tilt: 19.2°
- Segment: 106-124 - Tilt: 36.4°
- Segment: 138-153 - Tilt: 11.0°
- Segment: 167-182 - Tilt: 26.6°
- Segment: 213-230 - Tilt: 35.4°
- Segment: 245-258 - Tilt: 7.4°
- Segment: 276-291 - Tilt: 10.3°
- Segment: 295-311 - Tilt: 30.4°
- Segment: 335-351 - Tilt: 20.8°
- Segment: 360-375 - Tilt: 12.3°
Structural assessment:
MAIDEN score = -34.6841
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]