Transporter transmembrane protein
Organism: Herbaspirillum seropedicae
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D8J0G8
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.5 Å
Number of TM segments = 4
Sequence positions:
: 87-102|104-128|142-157|183-199
Tilt angles:
- Segment: 87-102 - Tilt: 41.6°
- Segment: 104-128 - Tilt: 53.4°
- Segment: 142-157 - Tilt: 43.7°
- Segment: 183-199 - Tilt: 38.4°
Structural assessment:
MAIDEN score = 22.0817
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]