Putative transmembrane transporter
Organism: Bacteroides fragilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E1WQ41
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 10
Sequence positions:
: 14-39|127-148|159-180|192-225|255-278|291-311|323-342|344-368|384-405|411-432
Tilt angles:
- Segment: 14-39 - Tilt: 38.7°
- Segment: 127-148 - Tilt: 27.6°
- Segment: 159-180 - Tilt: 16.9°
- Segment: 192-225 - Tilt: 29.6°
- Segment: 255-278 - Tilt: 33.4°
- Segment: 291-311 - Tilt: 13.8°
- Segment: 323-342 - Tilt: 23.7°
- Segment: 344-368 - Tilt: 37.8°
- Segment: 384-405 - Tilt: 25.0°
- Segment: 411-432 - Tilt: 12.1°
Structural assessment:
MAIDEN score = -7.0139
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]