Putative transmembrane protein
Organism: Bacteroides fragilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E1WRV6
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.9 Å
Number of TM segments = 10
Sequence positions:
: 13-31|41-57|140-159|173-189|233-255|268-296|298-315|329-348|367-385|394-415
Tilt angles:
- Segment: 13-31 - Tilt: 26.5°
- Segment: 41-57 - Tilt: 3.8°
- Segment: 140-159 - Tilt: 36.1°
- Segment: 173-189 - Tilt: 30.9°
- Segment: 233-255 - Tilt: 38.2°
- Segment: 268-296 - Tilt: 46.3°
- Segment: 298-315 - Tilt: 23.1°
- Segment: 329-348 - Tilt: 26.2°
- Segment: 367-385 - Tilt: 21.5°
- Segment: 394-415 - Tilt: 36.9°
Structural assessment:
MAIDEN score = -7.1916
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]