7 transmembrane receptor
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SHW2
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 7
Sequence positions:
: 27-50|57-78|99-128|144-163|199-216|255-276|284-305
Tilt angles:
- Segment: 27-50 - Tilt: 58.8°
- Segment: 57-78 - Tilt: 45.3°
- Segment: 99-128 - Tilt: 40.6°
- Segment: 144-163 - Tilt: 38.3°
- Segment: 199-216 - Tilt: 22.7°
- Segment: 255-276 - Tilt: 43.4°
- Segment: 284-305 - Tilt: 50.2°
Structural assessment:
MAIDEN score = -21.2559
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]