7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 6
Sequence positions:
: 114-130|142-155|180-194|226-240|270-286|312-326
Tilt angles:
- Segment: 114-130 - Tilt: 15.4°
- Segment: 142-155 - Tilt: 12.3°
- Segment: 180-194 - Tilt: 40.3°
- Segment: 226-240 - Tilt: 35.0°
- Segment: 270-286 - Tilt: 33.5°
- Segment: 312-326 - Tilt: 29.9°
Structural assessment:
MAIDEN score = -21.6543
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]