7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 45-60|76-88|136-150|178-190|219-233|322-335
Tilt angles:
- Segment: 45-60 - Tilt: 32.6°
- Segment: 76-88 - Tilt: 16.5°
- Segment: 136-150 - Tilt: 25.0°
- Segment: 178-190 - Tilt: 19.3°
- Segment: 219-233 - Tilt: 24.9°
- Segment: 322-335 - Tilt: 33.2°
Structural assessment:
MAIDEN score = -28.4479
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]