7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 36.0 Å
Number of TM segments = 5
Sequence positions:
: 176-201|216-243|264-292|310-335|351-372
Tilt angles:
- Segment: 176-201 - Tilt: 27.5°
- Segment: 216-243 - Tilt: 9.7°
- Segment: 264-292 - Tilt: 35.5°
- Segment: 310-335 - Tilt: 23.6°
- Segment: 351-372 - Tilt: 15.9°
Structural assessment:
MAIDEN score = -45.6033
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]