7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 6
Sequence positions:
: 44-61|75-94|105-129|178-192|205-245|259-266
Tilt angles:
- Segment: 44-61 - Tilt: 36.9°
- Segment: 75-94 - Tilt: 38.6°
- Segment: 105-129 - Tilt: 59.1°
- Segment: 178-192 - Tilt: 42.7°
- Segment: 205-245 - Tilt: 66.4°
- Segment: 259-266 - Tilt: 21.4°
Structural assessment:
MAIDEN score = 34.4777
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]