7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 6
Sequence positions:
: 78-99|103-128|143-162|220-238|316-329|346-361
Tilt angles:
- Segment: 78-99 - Tilt: 55.8°
- Segment: 103-128 - Tilt: 64.4°
- Segment: 143-162 - Tilt: 50.8°
- Segment: 220-238 - Tilt: 50.0°
- Segment: 316-329 - Tilt: 36.7°
- Segment: 346-361 - Tilt: 39.1°
Structural assessment:
MAIDEN score = -18.7918
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]