7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 6
Sequence positions:
: 57-99|221-240|283-290|297-307|309-336|342-364
Tilt angles:
- Segment: 57-99 - Tilt: 57.4°
- Segment: 221-240 - Tilt: 58.6°
- Segment: 283-290 - Tilt: 41.4°
- Segment: 297-307 - Tilt: 56.7°
- Segment: 309-336 - Tilt: 65.0°
- Segment: 342-364 - Tilt: 63.5°
Structural assessment:
MAIDEN score = 72.8735
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]