Cytochrome c biogenesis protein transmembrane region
Organism: Treponema brennaborense
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: F4LPJ9
Pfam Acc: PF00578
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 4
Sequence positions:
: 307-313|322-335|340-347|372-400
Tilt angles:
- Segment: 307-313 - Tilt: 30.9°
- Segment: 322-335 - Tilt: 28.7°
- Segment: 340-347 - Tilt: 49.7°
- Segment: 372-400 - Tilt: 46.7°
Structural assessment:
MAIDEN score = 53.1175
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]