Cytochrome c biogenesis protein transmembrane region
Organism: Treponema brennaborense
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: F4LPJ9
Pfam Acc: PF00578
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 4
Sequence positions:
: 307-313|321-335|341-347|371-400
Tilt angles:
- Segment: 307-313 - Tilt: 18.5°
- Segment: 321-335 - Tilt: 25.9°
- Segment: 341-347 - Tilt: 29.0°
- Segment: 371-400 - Tilt: 34.6°
Structural assessment:
MAIDEN score = 40.1810
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]