Transmembrane protein
Organism: Dictyostelium fasciculatum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: F4PJF1
Pfam Acc: PF00689
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 10
Sequence positions:
: 117-141|148-166|311-330|337-352|724-744|747-766|789-805|825-839|856-874|892-908
Tilt angles:
- Segment: 117-141 - Tilt: 47.0°
- Segment: 148-166 - Tilt: 32.8°
- Segment: 311-330 - Tilt: 33.1°
- Segment: 337-352 - Tilt: 42.5°
- Segment: 724-744 - Tilt: 31.3°
- Segment: 747-766 - Tilt: 47.5°
- Segment: 789-805 - Tilt: 26.6°
- Segment: 825-839 - Tilt: 19.0°
- Segment: 856-874 - Tilt: 28.0°
- Segment: 892-908 - Tilt: 18.3°
Structural assessment:
MAIDEN score = -35.8808
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]