Probabable nadh dehydrogenase i chain m transmembrane protein
Organism: Sinorhizobium meliloti
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: F7X2Z5
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 13
Sequence positions:
: 34-52|87-106|116-133|135-154|166-186|211-238|240-260|278-297|300-318|330-349|372-397|410-430|449-468
Tilt angles:
- Segment: 34-52 - Tilt: 11.4°
- Segment: 87-106 - Tilt: 24.6°
- Segment: 116-133 - Tilt: 19.5°
- Segment: 135-154 - Tilt: 23.5°
- Segment: 166-186 - Tilt: 32.3°
- Segment: 211-238 - Tilt: 40.2°
- Segment: 240-260 - Tilt: 19.3°
- Segment: 278-297 - Tilt: 32.3°
- Segment: 300-318 - Tilt: 16.1°
- Segment: 330-349 - Tilt: 20.3°
- Segment: 372-397 - Tilt: 36.3°
- Segment: 410-430 - Tilt: 37.2°
- Segment: 449-468 - Tilt: 23.3°
Structural assessment:
MAIDEN score = -133.1409
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]