Transmembrane receptor LIN-17
Organism: Caenorhabditis elegans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: G5EDV1
Pfam Acc: PF01534
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 7
Sequence positions:
: 209-224|242-271|276-306|339-355|368-396|420-438|478-496
Tilt angles:
- Segment: 209-224 - Tilt: 22.6°
- Segment: 242-271 - Tilt: 58.8°
- Segment: 276-306 - Tilt: 60.4°
- Segment: 339-355 - Tilt: 37.4°
- Segment: 368-396 - Tilt: 64.9°
- Segment: 420-438 - Tilt: 49.7°
- Segment: 478-496 - Tilt: 53.4°
Structural assessment:
MAIDEN score = -47.1910
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]