Transmembrane receptor LIN-17
Organism: Caenorhabditis elegans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: G5EDV1
Pfam Acc: PF01534
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 38.0 Å
Number of TM segments = 7
Sequence positions:
: 205-230|233-260|285-318|323-349|372-398|417-441|474-499
Tilt angles:
- Segment: 205-230 - Tilt: 19.2°
- Segment: 233-260 - Tilt: 25.7°
- Segment: 285-318 - Tilt: 39.2°
- Segment: 323-349 - Tilt: 28.5°
- Segment: 372-398 - Tilt: 29.9°
- Segment: 417-441 - Tilt: 13.7°
- Segment: 474-499 - Tilt: 25.7°
Structural assessment:
MAIDEN score = -89.8977
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]