Transmembrane receptor LIN-17
Organism: Caenorhabditis elegans
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: G5EDV1
Pfam Acc: PF01534
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 39.0 Å
Number of TM segments = 7
Sequence positions:
A: 203-229|232-268|284-314|324-353|371-405|416-441|474-499
Tilt angles:
A - Segment: 203-229 - Tilt: 13.5°
A - Segment: 232-268 - Tilt: 20.6°
A - Segment: 284-314 - Tilt: 45.7°
A - Segment: 324-353 - Tilt: 26.7°
A - Segment: 371-405 - Tilt: 40.3°
A - Segment: 416-441 - Tilt: 15.4°
A - Segment: 474-499 - Tilt: 18.5°
Structural assessment:
MAIDEN score = -98.8975
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]