Leucine-rich transmembrane protein
Organism: Danaus plexippus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: G6CN02
Pfam Acc: PF13855
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 211-217|222-231|233-241|246-254|257-264|270-279|281-289|294-303|305-312|318-327|356-362
Tilt angles:
- Segment: 211-217 - Tilt: 8.8°
- Segment: 222-231 - Tilt: 10.0°
- Segment: 233-241 - Tilt: 14.0°
- Segment: 246-254 - Tilt: 12.2°
- Segment: 257-264 - Tilt: 26.7°
- Segment: 270-279 - Tilt: 1.9°
- Segment: 281-289 - Tilt: 15.8°
- Segment: 294-303 - Tilt: 18.4°
- Segment: 305-312 - Tilt: 32.2°
- Segment: 318-327 - Tilt: 35.2°
- Segment: 356-362 - Tilt: 32.2°
Structural assessment:
MAIDEN score = 63.1955
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]