Transmembrane ion channel
Organism: Pristionchus pacificus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: H3E2D3
Pfam Acc: PF02931
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 3
Sequence positions:
: 176-185|194-234|310-357
Tilt angles:
- Segment: 176-185 - Tilt: 23.2°
- Segment: 194-234 - Tilt: 56.2°
- Segment: 310-357 - Tilt: 59.6°
Structural assessment:
MAIDEN score = -17.1926
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]