Transmembrane water channel
Organism: Nocardia cyriacigeorgica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: H6R7R1
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.4 Å
Number of TM segments = 6
Sequence positions:
: 24-41|52-66|96-117|166-180|190-203|235-253
Tilt angles:
- Segment: 24-41 - Tilt: 40.8°
- Segment: 52-66 - Tilt: 27.6°
- Segment: 96-117 - Tilt: 61.9°
- Segment: 166-180 - Tilt: 24.0°
- Segment: 190-203 - Tilt: 6.5°
- Segment: 235-253 - Tilt: 48.9°
Structural assessment:
MAIDEN score = -37.7444
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]