Cbb3-type cytochrome c oxidase subunit I transmembrane protein
Organism: Herbaspirillum sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: I3CPI1
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 35.0 Å
Number of TM segments = 8
Sequence positions:
: 43-59|61-87|202-225|233-253|268-293|301-327|339-368|370-399
Tilt angles:
- Segment: 43-59 - Tilt: 25.9°
- Segment: 61-87 - Tilt: 30.9°
- Segment: 202-225 - Tilt: 22.9°
- Segment: 233-253 - Tilt: 14.1°
- Segment: 268-293 - Tilt: 24.8°
- Segment: 301-327 - Tilt: 33.8°
- Segment: 339-368 - Tilt: 39.4°
- Segment: 370-399 - Tilt: 36.1°
Structural assessment:
MAIDEN score = -41.6447
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]