Metabolite transport protein YdfJ
Organism: Escherichia coli
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: J7R138
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 165-180|213-221|226-245|260-272|288-303
Tilt angles:
- Segment: 165-180 - Tilt: 54.0°
- Segment: 213-221 - Tilt: 32.8°
- Segment: 226-245 - Tilt: 48.8°
- Segment: 260-272 - Tilt: 38.8°
- Segment: 288-303 - Tilt: 46.8°
Structural assessment:
MAIDEN score = -19.6586
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]