Transmembrane water channel
Organism: Nocardia brasiliensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: K0EKE9
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 6
Sequence positions:
: 24-42|48-65|96-114|160-174|194-221|232-246
Tilt angles:
- Segment: 24-42 - Tilt: 45.6°
- Segment: 48-65 - Tilt: 36.9°
- Segment: 96-114 - Tilt: 48.1°
- Segment: 160-174 - Tilt: 25.3°
- Segment: 194-221 - Tilt: 29.5°
- Segment: 232-246 - Tilt: 30.1°
Structural assessment:
MAIDEN score = -44.6352
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]