Transmembrane water channel
Organism: Nocardia brasiliensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: K0EKE9
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 24-39|52-69|97-111|157-173|191-222|231-243
Tilt angles:
- Segment: 24-39 - Tilt: 38.4°
- Segment: 52-69 - Tilt: 49.9°
- Segment: 97-111 - Tilt: 25.7°
- Segment: 157-173 - Tilt: 34.1°
- Segment: 191-222 - Tilt: 44.5°
- Segment: 231-243 - Tilt: 24.0°
Structural assessment:
MAIDEN score = -41.6309
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]