Transmembrane water channel
Organism: Nocardia brasiliensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: K0EKE9
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 6
Sequence positions:
: 24-41|52-66|96-114|164-178|191-205|235-250
Tilt angles:
- Segment: 24-41 - Tilt: 45.4°
- Segment: 52-66 - Tilt: 32.1°
- Segment: 96-114 - Tilt: 57.5°
- Segment: 164-178 - Tilt: 12.8°
- Segment: 191-205 - Tilt: 20.1°
- Segment: 235-250 - Tilt: 40.1°
Structural assessment:
MAIDEN score = -49.9124
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]