Cytochrome c biogenesis protein transmembrane region
Organism: Thalassospira profundimaris
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: K2M213
Pfam Acc: PF02683
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 4
Sequence positions:
: 38-54|58-79|81-99|166-226
Tilt angles:
- Segment: 38-54 - Tilt: 40.1°
- Segment: 58-79 - Tilt: 53.3°
- Segment: 81-99 - Tilt: 56.2°
- Segment: 166-226 - Tilt: 30.4°
Structural assessment:
MAIDEN score = 39.6736
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]