Neurotransmitter-gated ion-channel transmembrane region/Neurotransmitter-gated ion-channel ligand binding domain protein
Organism: Synechococcus sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: K9RYY5
Pfam Acc: PF02931
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.8 Å
Number of TM segments = 3
Sequence positions:
: 217-239|253-276|278-297
Tilt angles:
- Segment: 217-239 - Tilt: 42.5°
- Segment: 253-276 - Tilt: 43.8°
- Segment: 278-297 - Tilt: 37.1°
Structural assessment:
MAIDEN score = -19.5468
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]