Putative transmembrane drug efflux protein
Organism: uncultured bacterium
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: L7VTW8
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.9 Å
Number of TM segments = 9
Sequence positions:
: 343-362|463-480|486-503|532-559|917-935|945-963|972-990|1020-1037|1043-1063
Tilt angles:
- Segment: 343-362 - Tilt: 23.6°
- Segment: 463-480 - Tilt: 18.7°
- Segment: 486-503 - Tilt: 20.6°
- Segment: 532-559 - Tilt: 44.3°
- Segment: 917-935 - Tilt: 6.4°
- Segment: 945-963 - Tilt: 33.8°
- Segment: 972-990 - Tilt: 13.0°
- Segment: 1020-1037 - Tilt: 13.5°
- Segment: 1043-1063 - Tilt: 36.0°
Structural assessment:
MAIDEN score = -38.1316
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]