Putative transmembrane drug efflux protein
Organism: uncultured bacterium
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: L7VTW8
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 9
Sequence positions:
: 22-39|338-359|387-402|415-432|446-471|492-508|581-597|977-1005|1020-1040
Tilt angles:
- Segment: 22-39 - Tilt: 41.2°
- Segment: 338-359 - Tilt: 39.3°
- Segment: 387-402 - Tilt: 16.0°
- Segment: 415-432 - Tilt: 41.4°
- Segment: 446-471 - Tilt: 29.4°
- Segment: 492-508 - Tilt: 20.7°
- Segment: 581-597 - Tilt: 19.9°
- Segment: 977-1005 - Tilt: 57.5°
- Segment: 1020-1040 - Tilt: 51.8°
Structural assessment:
MAIDEN score = -13.6776
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]