Transmembrane protein drug efflux protein
Organism: Janthinobacterium sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: L9PAJ2
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.1 Å
Number of TM segments = 8
Sequence positions:
: 13-34|334-355|369-393|397-419|445-465|473-496|542-561|868-891
Tilt angles:
- Segment: 13-34 - Tilt: 21.7°
- Segment: 334-355 - Tilt: 6.1°
- Segment: 369-393 - Tilt: 36.2°
- Segment: 397-419 - Tilt: 9.1°
- Segment: 445-465 - Tilt: 27.8°
- Segment: 473-496 - Tilt: 32.5°
- Segment: 542-561 - Tilt: 17.7°
- Segment: 868-891 - Tilt: 29.3°
Structural assessment:
MAIDEN score = -71.8576
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]