Transmembrane protein drug efflux protein
Organism: Janthinobacterium sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: L9PAJ2
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.4 Å
Number of TM segments = 10
Sequence positions:
: 16-34|335-352|373-393|399-416|448-464|473-494|545-560|870-886|975-991|993-1007
Tilt angles:
- Segment: 16-34 - Tilt: 18.0°
- Segment: 335-352 - Tilt: 5.8°
- Segment: 373-393 - Tilt: 36.0°
- Segment: 399-416 - Tilt: 19.0°
- Segment: 448-464 - Tilt: 22.1°
- Segment: 473-494 - Tilt: 38.8°
- Segment: 545-560 - Tilt: 17.5°
- Segment: 870-886 - Tilt: 30.9°
- Segment: 975-991 - Tilt: 28.6°
- Segment: 993-1007 - Tilt: 20.9°
Structural assessment:
MAIDEN score = -50.0110
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]