Transmembrane transporter
Organism: Candidatus Kinetoplastibacterium
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: M1LVP3
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.4 Å
Number of TM segments = 6
Sequence positions:
: 58-79|88-108|110-131|147-169|174-189|220-236
Tilt angles:
- Segment: 58-79 - Tilt: 19.8°
- Segment: 88-108 - Tilt: 28.5°
- Segment: 110-131 - Tilt: 47.0°
- Segment: 147-169 - Tilt: 44.1°
- Segment: 174-189 - Tilt: 6.8°
- Segment: 220-236 - Tilt: 18.4°
Structural assessment:
MAIDEN score = -10.9080
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]