Putative NADH dehydrogenase I chain L transmembrane protein
Organism: Sinorhizobium meliloti
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: M4MR45
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 14
Sequence positions:
: 29-43|91-105|115-129|141-155|168-182|242-259|267-282|301-315|327-341|352-367|396-424|441-454|483-501|542-552
Tilt angles:
- Segment: 29-43 - Tilt: 27.2°
- Segment: 91-105 - Tilt: 25.5°
- Segment: 115-129 - Tilt: 32.5°
- Segment: 141-155 - Tilt: 18.6°
- Segment: 168-182 - Tilt: 23.4°
- Segment: 242-259 - Tilt: 20.8°
- Segment: 267-282 - Tilt: 39.7°
- Segment: 301-315 - Tilt: 28.1°
- Segment: 327-341 - Tilt: 22.2°
- Segment: 352-367 - Tilt: 22.6°
- Segment: 396-424 - Tilt: 44.5°
- Segment: 441-454 - Tilt: 39.3°
- Segment: 483-501 - Tilt: 43.4°
- Segment: 542-552 - Tilt: 17.7°
Structural assessment:
MAIDEN score = -8.4461
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]