Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 10
Sequence positions:
: 19-37|42-54|102-116|166-182|198-218|243-257|289-303|342-356|383-397|402-417
Tilt angles:
- Segment: 19-37 - Tilt: 33.9°
- Segment: 42-54 - Tilt: 15.0°
- Segment: 102-116 - Tilt: 28.0°
- Segment: 166-182 - Tilt: 39.7°
- Segment: 198-218 - Tilt: 49.6°
- Segment: 243-257 - Tilt: 26.7°
- Segment: 289-303 - Tilt: 38.9°
- Segment: 342-356 - Tilt: 37.8°
- Segment: 383-397 - Tilt: 31.5°
- Segment: 402-417 - Tilt: 17.0°
Structural assessment:
MAIDEN score = -26.9000
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]