Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 8
Sequence positions:
: 100-111|172-184|193-215|244-257|287-300|346-360|377-393|402-418
Tilt angles:
- Segment: 100-111 - Tilt: 7.4°
- Segment: 172-184 - Tilt: 23.0°
- Segment: 193-215 - Tilt: 60.0°
- Segment: 244-257 - Tilt: 32.1°
- Segment: 287-300 - Tilt: 28.4°
- Segment: 346-360 - Tilt: 34.3°
- Segment: 377-393 - Tilt: 53.3°
- Segment: 402-418 - Tilt: 14.3°
Structural assessment:
MAIDEN score = -35.6284
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]