Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
: 18-34|41-53|100-112|241-259|284-298|347-360|379-394|404-414
Tilt angles:
- Segment: 18-34 - Tilt: 50.6°
- Segment: 41-53 - Tilt: 15.7°
- Segment: 100-112 - Tilt: 21.5°
- Segment: 241-259 - Tilt: 51.0°
- Segment: 284-298 - Tilt: 22.3°
- Segment: 347-360 - Tilt: 39.9°
- Segment: 379-394 - Tilt: 47.2°
- Segment: 404-414 - Tilt: 28.2°
Structural assessment:
MAIDEN score = -28.4604
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]