Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 6
Sequence positions:
: 14-28|39-57|73-99|188-213|323-337|412-431
Tilt angles:
- Segment: 14-28 - Tilt: 41.8°
- Segment: 39-57 - Tilt: 58.1°
- Segment: 73-99 - Tilt: 41.9°
- Segment: 188-213 - Tilt: 66.5°
- Segment: 323-337 - Tilt: 49.5°
- Segment: 412-431 - Tilt: 54.4°
Structural assessment:
MAIDEN score = 17.6877
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]