Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 19-32|45-58|101-116|165-179|201-215|245-257|287-300|342-356|383-395|403-418|450-463
Tilt angles:
- Segment: 19-32 - Tilt: 26.1°
- Segment: 45-58 - Tilt: 30.7°
- Segment: 101-116 - Tilt: 40.1°
- Segment: 165-179 - Tilt: 38.2°
- Segment: 201-215 - Tilt: 30.8°
- Segment: 245-257 - Tilt: 20.6°
- Segment: 287-300 - Tilt: 29.4°
- Segment: 342-356 - Tilt: 37.1°
- Segment: 383-395 - Tilt: 35.6°
- Segment: 403-418 - Tilt: 50.1°
- Segment: 450-463 - Tilt: 22.5°
Structural assessment:
MAIDEN score = -49.0966
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]