Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 8
Sequence positions:
: 15-38|42-56|103-121|162-182|195-211|236-260|283-301|343-359
Tilt angles:
- Segment: 15-38 - Tilt: 49.6°
- Segment: 42-56 - Tilt: 14.4°
- Segment: 103-121 - Tilt: 35.4°
- Segment: 162-182 - Tilt: 55.3°
- Segment: 195-211 - Tilt: 32.6°
- Segment: 236-260 - Tilt: 38.3°
- Segment: 283-301 - Tilt: 47.7°
- Segment: 343-359 - Tilt: 21.8°
Structural assessment:
MAIDEN score = -23.9149
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]