Na(+):neurotransmitter symporter (Snf family)
Organism: Aquifex aeolicus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: O67854
Pfam Acc: PF00209
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.6 Å
Number of TM segments = 6
Sequence positions:
: 94-119|169-263|288-309|314-367|370-395|402-422
Tilt angles:
- Segment: 94-119 - Tilt: 42.6°
- Segment: 169-263 - Tilt: 7.0°
- Segment: 288-309 - Tilt: 23.7°
- Segment: 314-367 - Tilt: 57.6°
- Segment: 370-395 - Tilt: 41.1°
- Segment: 402-422 - Tilt: 26.4°
Structural assessment:
MAIDEN score = -12.7536
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]