Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 12
Sequence positions:
: 24-37|57-71|107-125|143-163|197-208|238-255|278-292|311-328|334-352|378-391|410-424|456-471
Tilt angles:
- Segment: 24-37 - Tilt: 27.5°
- Segment: 57-71 - Tilt: 42.3°
- Segment: 107-125 - Tilt: 24.2°
- Segment: 143-163 - Tilt: 60.4°
- Segment: 197-208 - Tilt: 8.5°
- Segment: 238-255 - Tilt: 51.1°
- Segment: 278-292 - Tilt: 22.2°
- Segment: 311-328 - Tilt: 45.5°
- Segment: 334-352 - Tilt: 52.8°
- Segment: 378-391 - Tilt: 26.1°
- Segment: 410-424 - Tilt: 28.6°
- Segment: 456-471 - Tilt: 16.2°
Structural assessment:
MAIDEN score = -58.4628
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]